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First BASE Laboratories basic local alignment search tool (blast)
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Lynnon corporation nucleotide-nucleotide basic local alignment search tool (blast)
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Metagenom Bio Inc basic local alignment search tool (blast algorithm) for bacterial 16s
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Clinical and Laboratory Standards Institute basic local alignment search tool (blast) database
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Shanghai ShineGene basic local alignment search tool (blast)
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InterPro Inc basic local alignment search tool
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MYCO Medical basic local alignment search tool program
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PrimerDesign Inc basic local alignment tool (blast)
Modules, objectives, and learning outcomes of the workshop
Basic Local Alignment Tool (Blast), supplied by PrimerDesign Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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OnRamp BioInformatics blastx: basic local alignment search tool
Modules, objectives, and learning outcomes of the workshop
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GenBase Inc basic local alignment search tool
The whole architecture <t>of</t> <t>GenBase</t> The user-friendly generic sequence submission portal consists of 9 sections that enable real-time validation: Submitter, Reference, Technology, Nucleotide, Set/Batch, Category, Modifiers, Features, and Overview. An asterisk (*) indicates optional steps in SARS-CoV-2 submissions. GenBase integrates GenBank sequences for daily updates. Processed data are stored in distributed accession and ES index databases. Released sequences in GenBase are easily accessible, searchable, downloadable, and analyzable. They are also exchanged with GenBank, promoting data sharing and accessibility. ES, Elasticsearch; FTP, File Transfer Protocol; API, Application Programming Interface; <t>BLAST,</t> Basic Local Alignment Search Tool.
Basic Local Alignment Search Tool, supplied by GenBase Inc, used in various techniques. Bioz Stars score: 90/100, based on 1 PubMed citations. ZERO BIAS - scores, article reviews, protocol conditions and more
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Image Search Results


Modules, objectives, and learning outcomes of the workshop

Journal: BMC Microbiology

Article Title: Enable, empower, succeed: a bioinformatics workshop Harnessing open web-based tools for surveillance of bacterial antimicrobial resistance

doi: 10.1186/s12866-025-03865-0

Figure Lengend Snippet: Modules, objectives, and learning outcomes of the workshop

Article Snippet: Basic Local Alignment Tool (BLAST) , - Sequence alignment theory and applications - BLAST theory and practice - Overview of primer design , - Interpret the information conveyed in NCBI BLAST search outputs and infer their significance - Examine the annotations of reported matches and their provenance - Export BLAST results.

Techniques: Sequencing, In Silico, Construct

The whole architecture of GenBase The user-friendly generic sequence submission portal consists of 9 sections that enable real-time validation: Submitter, Reference, Technology, Nucleotide, Set/Batch, Category, Modifiers, Features, and Overview. An asterisk (*) indicates optional steps in SARS-CoV-2 submissions. GenBase integrates GenBank sequences for daily updates. Processed data are stored in distributed accession and ES index databases. Released sequences in GenBase are easily accessible, searchable, downloadable, and analyzable. They are also exchanged with GenBank, promoting data sharing and accessibility. ES, Elasticsearch; FTP, File Transfer Protocol; API, Application Programming Interface; BLAST, Basic Local Alignment Search Tool.

Journal: Genomics, Proteomics & Bioinformatics

Article Title: GenBase: A Nucleotide Sequence Database

doi: 10.1093/gpbjnl/qzae047

Figure Lengend Snippet: The whole architecture of GenBase The user-friendly generic sequence submission portal consists of 9 sections that enable real-time validation: Submitter, Reference, Technology, Nucleotide, Set/Batch, Category, Modifiers, Features, and Overview. An asterisk (*) indicates optional steps in SARS-CoV-2 submissions. GenBase integrates GenBank sequences for daily updates. Processed data are stored in distributed accession and ES index databases. Released sequences in GenBase are easily accessible, searchable, downloadable, and analyzable. They are also exchanged with GenBank, promoting data sharing and accessibility. ES, Elasticsearch; FTP, File Transfer Protocol; API, Application Programming Interface; BLAST, Basic Local Alignment Search Tool.

Article Snippet: Thirdly, GenBase incorporates sequence analysis tools such as Basic Local Alignment Search Tool (BLAST) [ ], making it convenient for users to analyze sequences within the platform.

Techniques: Sequencing, Biomarker Discovery